Negative cofitness for GFF5852 from Variovorax sp. SCN45

Type I secretion membrane fusion protein, HlyD family @ Type I secretion system, membrane fusion protein LapC
SEED: Type I secretion system, membrane fusion protein LapC

Computing cofitness values with 61 experiments...

Genes with the strongest negative cofitness:

Rank	Hit	Name	Description	Cofit
1	GFF5731		Methyl-accepting chemotaxis sensor/transducer protein	-0.46
2	GFF5682		TRAP-type transport system, periplasmic component	-0.44
3	GFF4718		ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines)	-0.44
4	GFF5991		Efflux transport system, outer membrane factor (OMF) lipoprotein	-0.41
5	GFF2440		KEGG: RNA polymerase sigma-70 factor, ECF subfamily	-0.39
6	GFF7337		ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines)	-0.39
7	GFF7161		Transcriptional regulator, LysR family	-0.38
8	GFF5198		ABC transporter, permease protein (cluster 2, ribose/xylose/arabinose/galactose)	-0.38
9	GFF5038		Tetracycline resistance, MFS efflux pump => Tet(C)	-0.38
10	GFF5196		L-arabinose ABC transporter, permease protein AraH	-0.37
11	GFF6771		2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58)	-0.37
12	GFF4772		D-mannose isomerase (EC 5.3.1.7)	-0.37
13	GFF2360		GGDEF domain protein	-0.36
14	GFF4256		Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82)	-0.36
15	GFF1975		hypothetical protein	-0.36
16	GFF6957		Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22)	-0.36
17	GFF4501		Transcriptional regulator, LysR family	-0.36
18	GFF622		BUG/TctC family periplasmic protein	-0.36
19	GFF4483		ATP-dependent hsl protease ATP-binding subunit HslU	-0.36
20	GFF1452		Predicted gluconate TRAP family transporter, DctM subunit	-0.35

Or look for positive cofitness