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  • Negative cofitness for GFF5834 from Variovorax sp. SCN45

    Oxidoreductase, GMC family
    SEED: Choline dehydrogenase (EC 1.1.99.1)
    KEGG:

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3113 Methionine ABC transporter permease protein -0.58
    2 GFF2689 Protein containing transglutaminase-like domain, putative cysteine protease -0.52
    3 GFF4943 Chloride channel protein -0.52
    4 GFF1653 Transcriptional regulator, AcrR family -0.51
    5 GFF5944 Adenylosuccinate lyase (EC 4.3.2.2) -0.50
    6 GFF2474 Two-component transcriptional response regulator SMc02366, LuxR family -0.49
    7 GFF6718 no description -0.49
    8 GFF5793 Low-affinity inorganic phosphate transporter -0.48
    9 GFF4498 Exoenzymes regulatory protein AepA precursor -0.47
    10 GFF5652 FIG00014764: hypothetical protein -0.47
    11 GFF691 hypothetical protein -0.46
    12 GFF2118 hypothetical protein -0.46
    13 GFF7149 4-hydroxyproline epimerase (EC 5.1.1.8) -0.46
    14 GFF4949 ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) / ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) -0.45
    15 GFF893 FIG138928: iron-regulated membrane protein -0.45
    16 GFF3814 OpgC protein -0.45
    17 GFF5935 VgrG protein -0.45
    18 GFF6905 Chloride channel protein -0.45
    19 GFF2692 hypothetical protein -0.45
    20 GFF96 RNA polymerase ECF-type sigma factor -0.44

    Or look for positive cofitness