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  • Negative cofitness for GFF5833 from Variovorax sp. SCN45

    Oxidoreductase, short-chain dehydrogenase/reductase family
    SEED: Short-chain dehydrogenase/reductase SDR

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3970 Ring hydroxylating dioxygenase, alpha subunit (EC 1.14.12.13) -0.54
    2 GFF4720 Putrescine transport system permease protein potI -0.51
    3 GFF1630 Esterase/lipase -0.50
    4 GFF356 L-asparaginase (EC 3.5.1.1) -0.48
    5 GFF5353 Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) -0.47
    6 GFF628 hypothetical protein -0.47
    7 GFF6005 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) -0.46
    8 GFF5016 ATP-dependent RNA helicase RhlE (EC 3.6.4.13) -0.46
    9 GFF7006 Flagellar biosynthesis protein FliR -0.46
    10 GFF724 Fe2+-dicitrate sensor, membrane component -0.44
    11 GFF4430 hypothetical protein -0.44
    12 GFF4185 RNA polymerase ECF-type sigma factor -0.44
    13 GFF4547 no description -0.43
    14 GFF5394 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) -0.43
    15 GFF4744 Permease of the drug/metabolite transporter (DMT) superfamily -0.42
    16 GFF2684 Enoyl-CoA hydratase (EC 4.2.1.17) -0.42
    17 GFF5663 ABC transporter, fused permease protein -0.42
    18 GFF6473 hypothetical protein -0.42
    19 GFF4081 Multicopper oxidase -0.42
    20 GFF6556 hypothetical protein -0.41

    Or look for positive cofitness