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  • Negative cofitness for GFF5825 from Variovorax sp. SCN45

    Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1)
    SEED: Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1)
    KEGG: branched-chain amino acid transport system ATP-binding protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF2016 hypothetical protein -0.56
    2 GFF83 Alkanal monooxygenase alpha chain (EC 1.14.14.3) -0.54
    3 GFF2961 CzcABC family efflux RND transporter, transmembrane protein -0.54
    4 GFF5848 Flagellar motor protein -0.53
    5 GFF1259 no description -0.53
    6 GFF5096 similar to protocatechuate 4,5-dioxygenase beta chain -0.52
    7 GFF2684 Enoyl-CoA hydratase (EC 4.2.1.17) -0.51
    8 GFF4915 hypothetical protein -0.51
    9 GFF1903 Acyl-homoserine lactone acylase PvdQ (EC 3.5.1.-), quorum-quenching -0.50
    10 GFF264 Efflux transport system, outer membrane factor (OMF) lipoprotein -0.50
    11 GFF2473 hypothetical protein -0.50
    12 GFF4720 Putrescine transport system permease protein potI -0.49
    13 GFF1234 Peptide-methionine (S)-S-oxide reductase MsrA (EC 1.8.4.11) -0.49
    14 GFF1587 no description -0.49
    15 GFF1760 Probable transmembrane protein -0.48
    16 GFF3356 Probable transmembrane protein -0.48
    17 GFF1563 no description -0.48
    18 GFF5330 no description -0.48
    19 GFF1835 Indolepyruvate oxidoreductase subunit IorB II (EC 1.2.7.8) -0.47
    20 GFF6487 Gfa-like protein -0.47

    Or look for positive cofitness