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  • Negative cofitness for GFF5781 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF1594 Antitoxin DinJ (binds YafQ toxin) -0.59
    2 GFF808 Polyhydroxyalkanoic acid synthase -0.57
    3 GFF1792 Transcriptional regulator, IclR family -0.55
    4 GFF1372 Uncharacterized MFS-type transporter -0.54
    5 GFF5919 KEGG: type VI secretion system secreted protein Hcp -0.54
    6 GFF1520 Transcriptional regulator, IclR family -0.54
    7 GFF3076 SSU rRNA pseudouridine(516) synthase (EC 5.4.99.19) -0.54
    8 GFF6871 FIG00905613: hypothetical protein -0.53
    9 GFF2101 no description -0.53
    10 GFF5763 Signal transduction histidine kinase CheA -0.52
    11 GFF6355 T6SS secretion lipoprotein TssJ (VasD) -0.52
    12 GFF2543 Uncharacterized membrane protein Bcep18194_A6058 -0.52
    13 GFF3289 Putative phosphoesterase -0.51
    14 GFF6870 FIG00904791: hypothetical protein -0.51
    15 GFF244 Cys regulon transcriptional activator CysB -0.51
    16 GFF6666 Transcriptional regulator protein -0.50
    17 GFF6382 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) -0.50
    18 GFF1339 ABC transporter, permease protein 2 RSc1752 -0.50
    19 GFF6621 Mobile element protein -0.50
    20 GFF3838 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) -0.50

    Or look for positive cofitness