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  • Negative cofitness for GFF5727 from Variovorax sp. SCN45

    Methyl-accepting chemotaxis sensor/transducer protein
    SEED: Methyl-accepting chemotaxis protein I (serine chemoreceptor protein)

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6932 no description -0.55
    2 GFF6841 hypothetical protein -0.52
    3 GFF6459 Two-component transcriptional regulatory protein BasR/PmrA (activated by BasS/PmrB) -0.50
    4 GFF50 Murein hydrolase activator NlpD -0.50
    5 GFF378 RNA (nucleoside 2'-O)-methyltransferase -0.50
    6 GFF2528 ABC transporter, ATP-binding protein PA3838 -0.49
    7 GFF794 KEGG: RNA polymerase sigma-70 factor, ECF subfamily -0.49
    8 GFF2854 D-malate dehydrogenase [decarboxylating] (EC 1.1.1.83) -0.48
    9 GFF36 Similar to Agmatine deiminase -0.48
    10 GFF7378 protein of unknown function DUF1311 -0.47
    11 GFF4226 Acryloyl-CoA reductase AcuI/YhdH (EC 1.3.1.84) -0.47
    12 GFF2163 hypothetical protein -0.47
    13 GFF6403 Stresses-induced protein Ves (HutD) -0.47
    14 GFF3577 Transcriptional regulator, LysR family -0.47
    15 GFF420 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) -0.46
    16 GFF5163 Soluble lytic murein transglycosylase (EC 4.2.2.n1) -0.46
    17 GFF6175 hypothetical protein -0.46
    18 GFF5733 Methyl-accepting chemotaxis sensor/transducer protein -0.46
    19 GFF5783 hypothetical protein -0.45
    20 GFF4902 hypothetical protein -0.45

    Or look for positive cofitness