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  • Negative cofitness for GFF5700 from Variovorax sp. SCN45

    UPF0758 family protein
    SEED: DNA repair protein RadC
    KEGG: DNA repair protein RadC

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF5269 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) -0.51
    2 GFF6112 Oligopeptide ABC transporter, ATP-binding protein OppD (TC 3.A.1.5.1) -0.50
    3 GFF6350 T6SS Serine/threonine protein kinase (EC 2.7.11.1) PpkA -0.50
    4 GFF5255 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) -0.49
    5 GFF4904 hypothetical protein -0.47
    6 GFF5815 Uncharacterized MFS-type transporter -0.47
    7 GFF5936 T6SS AAA+ chaperone ClpV (TssH) -0.47
    8 GFF5581 SSU ribosomal protein S5p (S2e) -0.45
    9 GFF2551 Endonuclease/exonuclease/phosphatase -0.45
    10 GFF3447 FIG00555764: hypothetical protein -0.45
    11 GFF3533 Two-component system sensor histidine kinase -0.44
    12 GFF5461 2-dehydrotetronate isomerase (EC 5.3.1.35) -0.43
    13 GFF3757 hypothetical protein -0.43
    14 GFF4046 Cobalt/zinc/cadmium efflux RND transporter, transmembrane protein CzcA -0.42
    15 GFF2953 Transcriptional regulator, AraC family -0.42
    16 GFF1582 BUG/TctC family periplasmic protein -0.42
    17 GFF2607 hypothetical protein -0.41
    18 GFF336 no description -0.41
    19 GFF6479 hypothetical protein -0.41
    20 GFF3879 Uncharacterized protein, similar to the N-terminal domain of Lon protease -0.41

    Or look for positive cofitness