Negative cofitness for GFF5682 from Variovorax sp. SCN45

TRAP-type transport system, periplasmic component
SEED: TRAP-type C4-dicarboxylate transport system, periplasmic component

Computing cofitness values with 61 experiments...

Genes with the strongest negative cofitness:

Rank Hit Name Description Cofit  
1 GFF156 Glycosyl transferase, group 2 family -0.57
2 GFF6383 FIG00440100: hypothetical protein -0.56
3 GFF455 Uncharacterized UPF0721 integral membrane protein -0.54
4 GFF3076 SSU rRNA pseudouridine(516) synthase (EC 5.4.99.19) -0.54
5 GFF5917 T6SS component TssB (ImpB/VipA) -0.53
6 GFF2757 hypothetical protein -0.52
7 GFF5720 Flagellar basal-body rod protein FlgG -0.52
8 GFF5621 ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) -0.52
9 GFF7366 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) -0.52
10 GFF619 Aspartate carbamoyltransferase (EC 2.1.3.2) -0.51
11 GFF5959 Putative amidase R03093 -0.51
12 GFF1191 Predicted hydroxymethylpyrimidine transporter CytX -0.51
13 GFF1190 Glycine oxidase ThiO (EC 1.4.3.19) -0.51
14 GFF2328 no description -0.51
15 GFF5360 Putative transmembrane protein -0.50
16 GFF782 Alpha-ketoglutarate-dependent dioxygenase AlkB (EC 1.14.11.33) -0.50
17 GFF405 3-hydroxybutyrate dehydrogenase (EC 1.1.1.30) -0.50
18 GFF7339 ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) -0.49
19 GFF2227 Tricarboxylate transport protein TctC -0.49
20 GFF6621 Mobile element protein -0.49

Or look for positive cofitness