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  • Negative cofitness for GFF5667 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: Transcriptional regulator, LysR family

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4676 hypothetical protein -0.65
    2 GFF1384 Nitrilotriacetate monooxygenase component A (EC 1.14.13.-) -0.64
    3 GFF4385 ParA-like protein -0.64
    4 GFF4125 DNA-binding transcriptional regulator, MocR family / aminotransferase domain -0.57
    5 GFF7051 hypothetical protein -0.56
    6 GFF5840 hypothetical protein -0.56
    7 GFF1040 Oxidoreductase, short-chain dehydrogenase/reductase family -0.56
    8 GFF5057 Peptidoglycan D,D-transpeptidase MrdA (EC 3.4.16.4) -0.55
    9 GFF5325 3-dehydroquinate synthase (EC 4.2.3.4) -0.55
    10 GFF5410 Adenylate cyclase (EC 4.6.1.1) -0.55
    11 GFF4766 identified by similarity to GB:AAK22812.1; match to protein family HMM PF06676 -0.54
    12 GFF5248 Outer membrane porin protein 32 precursor -0.54
    13 GFF5487 Thymidine phosphorylase (EC 2.4.2.4) -0.54
    14 GFF3923 Kynurenine formamidase, bacterial (EC 3.5.1.9) -0.53
    15 GFF5668 Uncharacterized MFS-type transporter -0.53
    16 GFF2433 Putative OMR family iron-siderophore receptor precursor -0.52
    17 GFF6513 Phosphogluconate dehydratase (EC 4.2.1.12) -0.52
    18 GFF3828 hypothetical protein -0.52
    19 GFF6638 no description -0.52
    20 GFF5582 BUG/TctC family periplasmic protein -0.52

    Or look for positive cofitness