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  • Negative cofitness for GFF566 from Variovorax sp. SCN45

    Type IV fimbrial biogenesis protein PilV
    SEED: Type IV fimbrial biogenesis protein PilV
    KEGG: type IV pilus assembly protein PilV

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF5314 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ -0.61
    2 GFF4586 no description -0.55
    3 GFF2362 PQQ-dependent oxidoreductase, gdhB family -0.53
    4 GFF5255 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) -0.53
    5 GFF5656 Formate dehydrogenase O gamma subunit (EC 1.2.1.2) -0.51
    6 GFF1267 Probable lipoprotein signal peptide -0.50
    7 GFF7127 Mobile element protein -0.49
    8 GFF5278 Transaldolase (EC 2.2.1.2) -0.49
    9 GFF6072 Transcriptional regulator, LysR family -0.49
    10 GFF4564 hypothetical protein -0.49
    11 GFF643 no description -0.47
    12 GFF6391 RfbJ protein -0.47
    13 GFF6609 FIG00957806: hypothetical protein -0.46
    14 GFF4231 no description -0.46
    15 GFF1037 putative membrane protein -0.45
    16 GFF3793 no description -0.45
    17 GFF6368 T6SS lysozyme-like component TssE -0.45
    18 GFF7138 ATP-dependent 23S rRNA helicase DbpA -0.45
    19 GFF3342 FIG00347825: hypothetical protein -0.45
    20 GFF2764 Carbonic anhydrase-like protein MJ0304 -0.45

    Or look for positive cofitness