Negative cofitness for GFF5645 from Variovorax sp. SCN45

ABC transporter, permease protein (cluster 12, methionine/phosphonates) / ABC transporter, permease protein (cluster 12, methionine/phosphonates)
SEED: Phosphonate ABC transporter permease protein phnE1 (TC 3.A.1.9.1)
KEGG: phosphonate transport system permease protein

Computing cofitness values with 61 experiments...

Genes with the strongest negative cofitness:

Rank Hit Name Description Cofit  
1 GFF5194 L-arabinose ABC transporter, substrate-binding protein AraF -0.63
2 GFF2224 ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) -0.58
3 GFF1737 Carbon starvation protein A -0.56
4 GFF6056 Transcriptional regulator, LacI family -0.54
5 GFF4601 Enoyl-CoA hydratase (EC 4.2.1.17) -0.52
6 GFF3460 Urea ABC transporter, ATPase protein UrtE -0.51
7 GFF2876 no description -0.51
8 GFF2687 Protein containing domains DUF404, DUF407, DUF403 -0.51
9 GFF5526 Lysophospholipid transporter LplT / 2-acylglycerophosphoethanolamine acyltransferase (EC 2.3.1.40) -0.51
10 GFF374 Transcription elongation factor GreA -0.50
11 GFF2382 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.66) -0.50
12 GFF47 DNA double-strand break repair Rad50 ATPase -0.50
13 GFF6769 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases -0.49
14 GFF116 RidA/YER057c/UK114 superfamily, group 1 -0.49
15 GFF5264 Spermidine/putrescine import ABC transporter ATP-binding protein PotA (TC 3.A.1.11.1) -0.48
16 GFF2320 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) -0.48
17 GFF4028 Cytochrome c, class I -0.48
18 GFF6031 Branched-chain amino acid ABC transporter, ATP-binding protein LivG (TC 3.A.1.4.1) -0.48
19 GFF4230 Transcriptional regulator of pyridoxine metabolism / Pyridoxamine phosphate aminotransferase (EC 2.6.1.54) -0.48
20 GFF1018 23S rRNA (guanosine(2251)-2'-O)-methyltransferase (EC 2.1.1.185) -0.48

Or look for positive cofitness