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  • Negative cofitness for GFF5626 from Variovorax sp. SCN45

    Patatin
    SEED: Patatin

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF648 integral membrane sensor signal transduction histidine kinase -0.63
    2 GFF5754 Flagellar cap protein FliD -0.56
    3 GFF5918 T6SS component TssC (ImpC/VipB) -0.53
    4 GFF1524 FIG006045: Sigma factor, ECF subfamily -0.53
    5 GFF7209 ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) -0.53
    6 GFF214 Putative transmembrane protein -0.52
    7 GFF6996 Flagellar hook-basal body complex protein FliE -0.51
    8 GFF3173 Transcriptional regulator, IclR family -0.50
    9 GFF538 FIG00454528: hypothetical protein -0.49
    10 GFF347 Exported protein -0.49
    11 GFF1767 no description -0.49
    12 GFF1597 Acetolactate synthase large subunit (EC 2.2.1.6) -0.48
    13 GFF7264 Gluconolactonase (EC 3.1.1.17) -0.48
    14 GFF261 no description -0.48
    15 GFF6355 T6SS secretion lipoprotein TssJ (VasD) -0.48
    16 GFF1873 KEGG: LacI family transcriptional regulator -0.48
    17 GFF5723 Flagellar protein FlgJ [peptidoglycan hydrolase] -0.48
    18 GFF675 KEGG: 2'-5' RNA ligase -0.47
    19 GFF1606 Cys-tRNA(Pro) deacylase YbaK -0.47
    20 GFF6681 TonB-dependent siderophore receptor -0.47

    Or look for positive cofitness