Negative cofitness for GFF562 from Variovorax sp. SCN45

Type IV pilus biogenesis protein PilE
SEED: Type IV pilus biogenesis protein PilE
KEGG: type IV pilus assembly protein PilE

Computing cofitness values with 61 experiments...

Genes with the strongest negative cofitness:

Rank Hit Name Description Cofit  
1 GFF1140 Domain of unknown function / Efflux ABC transporter, permease protein -0.54
2 GFF6834 no description -0.53
3 GFF6470 TRAP-type C4-dicarboxylate transport system, large permease component -0.52
4 GFF1142 Efflux transport system, outer membrane factor (OMF) lipoprotein -0.52
5 GFF5467 Hydroxymethylpyrimidine ABC transporter, substrate-binding component -0.51
6 GFF4719 hypothetical protein -0.51
7 GFF3599 Rhodanese-related sulfurtransferase -0.50
8 GFF2499 ATP/GTP-binding protein -0.49
9 GFF3583 AMP nucleosidase (EC 3.2.2.4) -0.49
10 GFF3842 Uncharacterized protein EC-HemY in Proteobacteria (unrelated to HemY-type PPO in GramPositives) -0.49
11 GFF4977 Transcriptional regulator for ferulate or vanillate catabolism -0.49
12 GFF2357 DNA repair protein RecN -0.48
13 GFF2616 no description -0.48
14 GFF2909 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) -0.48
15 GFF460 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) -0.48
16 GFF5679 Uncharacterized MFS-type transporter -0.48
17 GFF3867 Translation elongation factor LepA -0.48
18 GFF290 Cell division coordinator CpoB -0.48
19 GFF6040 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent -0.48
20 GFF6770 2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21) -0.48

Or look for positive cofitness