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  • Negative cofitness for GFF5618 from Variovorax sp. SCN45

    ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate)
    SEED: Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1)
    KEGG: branched-chain amino acid transport system ATP-binding protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6448 Glucans biosynthesis protein D precursor -0.68
    2 GFF3667 Uncharacterized MFS-type transporter -0.62
    3 GFF2682 Protein containing domains DUF403 -0.61
    4 GFF5410 Adenylate cyclase (EC 4.6.1.1) -0.61
    5 GFF183 Virulence protein -0.61
    6 GFF3582 Tripartite tricarboxylate transporter TctC family -0.60
    7 GFF6635 FIG00441227: hypothetical protein -0.60
    8 GFF2613 no description -0.57
    9 GFF287 hypothetical protein -0.57
    10 GFF7367 Enoyl-CoA hydratase (EC 4.2.1.17) -0.57
    11 GFF3945 Phosphate transport regulator (distant homolog of PhoU) -0.56
    12 GFF1268 FIG022199: FAD-binding protein -0.56
    13 GFF2683 Protein containing domains DUF404, DUF407 -0.55
    14 GFF3798 FIG00932573: hypothetical protein -0.55
    15 GFF3153 Two-component transcriptional response regulator, LuxR family -0.55
    16 GFF6424 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) -0.55
    17 GFF1154 Putative transmembrane protein -0.54
    18 GFF3386 hypothetical protein -0.54
    19 GFF2990 Probable hydrolase protein (EC 3.-.-.-) -0.53
    20 GFF3730 Integral membrane protein -0.53

    Or look for positive cofitness