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  • Negative cofitness for GFF5612 from Variovorax sp. SCN45

    Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16)
    SEED: Aldehyde dehydrogenase (EC 1.2.1.3)
    KEGG: succinate-semialdehyde dehydrogenase (NADP+)

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF962 FIG00932012: hypothetical protein -0.54
    2 GFF7286 Dipeptide ABC transporter, ATP-binding protein DppD (TC 3.A.1.5.2) -0.49
    3 GFF5805 Putative transmembrane protein -0.47
    4 GFF2902 ABC transporter, substrate-binding protein (cluster 13, osmolytes) / ABC transporter, permease protein (cluster 13, osmolytes) -0.46
    5 GFF44 hypothetical protein -0.46
    6 GFF1544 Two-component system sensor histidine kinase/response regulator hybrid -0.46
    7 GFF2842 RNA polymerase sigma factor RpoS -0.45
    8 GFF3701 FIG004694: Hypothetical protein -0.45
    9 GFF5813 Heavy metal sensor histidine kinase -0.45
    10 GFF2849 hypothetical protein -0.44
    11 GFF363 Transcriptional regulator, Crp/Fnr family -0.44
    12 GFF52 Polyketide synthase modules and related proteins -0.44
    13 GFF5024 hypothetical protein -0.43
    14 GFF7249 no description -0.43
    15 GFF7160 hypothetical protein -0.43
    16 GFF1323 Methionine aminopeptidase (EC 3.4.11.18) -0.43
    17 GFF1952 Metallophosphoesterase -0.42
    18 GFF6980 Mobile element protein -0.42
    19 GFF4788 Uncharacterized protein COG3236 -0.42
    20 GFF1623 Glycerol-3-phosphate transporter -0.42

    Or look for positive cofitness