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  • Negative cofitness for GFF5607 from Variovorax sp. SCN45

    Sigma-54 activated regulatory protein
    SEED: Sigma-54 activated regulatory protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6823 BUG/TctC family periplasmic protein -0.55
    2 GFF6817 hypothetical protein -0.51
    3 GFF7413 no description -0.51
    4 GFF1801 Transcriptional regulator, LysR family -0.50
    5 GFF5264 Spermidine/putrescine import ABC transporter ATP-binding protein PotA (TC 3.A.1.11.1) -0.49
    6 GFF4957 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) -0.49
    7 GFF3187 hypothetical protein -0.49
    8 GFF3448 Oxidoreductase, short-chain dehydrogenase/reductase family -0.48
    9 GFF6486 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) -0.47
    10 GFF5051 MBL-fold metallohydrolase SPO0683 -0.47
    11 GFF1878 Bll6165 protein -0.47
    12 GFF5525 FIG00933173: hypothetical protein -0.46
    13 GFF4853 Transcriptional regulator, LysR family -0.46
    14 GFF1653 Transcriptional regulator, AcrR family -0.45
    15 GFF1848 Proteins incorrectly called adenylate cyclase -0.45
    16 GFF1185 Transcriptional regulator, AraC family -0.44
    17 GFF6821 ribonuclease H -0.43
    18 GFF258 Ribosomal protein L3 N(5)-glutamine methyltransferase (EC 2.1.1.298) -0.43
    19 GFF1700 hypothetical protein -0.43
    20 GFF1536 BUG/TctC family periplasmic protein -0.42

    Or look for positive cofitness