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  • Negative cofitness for PS417_28525 from Pseudomonas simiae WCS417

    RNA polymerase sigma factor
    SEED: FIG006045: Sigma factor, ECF subfamily
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_04270 ribonuclease G -0.23
    2 PS417_23370 protoheme IX farnesyltransferase -0.22
    3 PS417_23375 cytochrome C oxidase -0.21
    4 PS417_23150 Cro/Cl family transcriptional regulator -0.21
    5 PS417_23390 ubiquinol oxidase subunit II -0.21
    6 PS417_23385 cytochrome o ubiquinol oxidase subunit I -0.20
    7 PS417_06355 protein-L-isoaspartate O-methyltransferase -0.20
    8 PS417_15800 photosynthetic protein synthase I -0.19
    9 PS417_16560 GNAT family acetyltransferase -0.19
    10 PS417_27425 exopolyphosphatase -0.19
    11 PS417_18265 AsnC family transcriptional regulator -0.19
    12 PS417_23380 cytochrome o ubiquinol oxidase subunit III -0.18
    13 PS417_10265 peptidase -0.18
    14 PS417_04950 hypothetical protein -0.18
    15 PS417_01790 glucan biosynthesis protein G -0.17
    16 PS417_17295 RND transporter MFP subunit -0.17
    17 PS417_08170 capsular biosynthesis protein -0.17
    18 PS417_23890 ATPase -0.17
    19 PS417_01275 LysR family transcriptional regulator -0.17
    20 PS417_07165 dihydrodipicolinate synthase -0.17

    Or look for positive cofitness