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  • Negative cofitness for PS417_02830 from Pseudomonas simiae WCS417

    urea ABC transporter permease
    SEED: Urea ABC transporter, permease protein UrtB
    KEGG: branched-chain amino acid transport system permease protein

    Computing cofitness values with 554 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_13820 UDP-glucose 6-dehydrogenase -0.18
    2 PS417_11500 hypothetical protein -0.18
    3 PS417_02660 branched-chain amino acid transporter permease subunit LivH -0.18
    4 PS417_23760 DeoR faimly transcriptional regulator -0.17
    5 PS417_26405 diguanylate cyclase -0.17
    6 PS417_25355 AraC family transcriptional regulator -0.17
    7 PS417_13790 UDP phosphate 4-deoxy-4-formamido-L-arabinose transferase -0.17
    8 PS417_18700 LysR family transcriptional regulator -0.17
    9 PS417_22555 chemotaxis protein -0.17
    10 PS417_13800 4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase -0.17
    11 PS417_00280 radical SAM protein -0.17
    12 PS417_13805 4-amino-4-deoxy-L-arabinose transferase -0.17
    13 PS417_02435 flagellar motor protein MotA -0.17
    14 PS417_20105 glycosyl transferase -0.16
    15 PS417_11900 conjugal transfer protein TraR -0.16
    16 PS417_02440 flagellar motor protein MotB -0.16
    17 PS417_09085 hypothetical protein -0.16
    18 PS417_16285 diguanylate cyclase -0.16
    19 PS417_04915 glutamine ABC transporter ATP-binding protein -0.16
    20 PS417_01405 sugar transporter -0.16

    Or look for positive cofitness