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  • Negative cofitness for PS417_02825 from Pseudomonas simiae WCS417

    amino acid ABC transporter permease
    SEED: Urea ABC transporter, permease protein UrtC
    KEGG: branched-chain amino acid transport system permease protein

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_16390 peroxiredoxin -0.24
    2 PS417_08380 ABC transporter ATP-binding protein -0.22
    3 PS417_24085 protein RnfH -0.20
    4 PS417_18605 LysR family transcriptional regulator -0.20
    5 PS417_23945 ornithine aminotransferase -0.20
    6 PS417_15260 protein phosphatase -0.19
    7 PS417_15160 hypothetical protein -0.18
    8 PS417_13270 lipoprotein -0.18
    9 PS417_07420 restriction endonuclease -0.18
    10 PS417_13290 AraC family transcriptional regulator -0.18
    11 PS417_06435 glutathione S-transferase -0.18
    12 PS417_14645 hypothetical protein -0.17
    13 PS417_28170 transcriptional regulator -0.17
    14 PS417_00915 aminotransferase -0.17
    15 PS417_18575 aspartate-semialdehyde dehydrogenase -0.16
    16 PS417_03920 dephospho-CoA kinase -0.16
    17 PS417_23385 cytochrome o ubiquinol oxidase subunit I -0.16
    18 PS417_20930 50S rRNA methyltransferase -0.16
    19 PS417_01775 lipase -0.16
    20 PS417_08735 hypothetical protein -0.16

    Or look for positive cofitness