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  • Negative cofitness for GFF555 from Variovorax sp. SCN45

    Putative inner membrane protein
    SEED: Inner membrane protein
    KEGG: hypothetical protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4871 FIG00457034: hypothetical protein -0.55
    2 GFF5924 FOG: HEAT repeat -0.55
    3 GFF4566 hypothetical protein -0.54
    4 GFF5051 MBL-fold metallohydrolase SPO0683 -0.53
    5 GFF5616 hypothetical protein -0.52
    6 GFF1747 FIG00799528: hypothetical protein -0.52
    7 GFF6964 Cytochrome c oxidase (cbb3-type) subunit CcoN (EC 1.9.3.1) -0.52
    8 GFF3668 hypothetical protein -0.52
    9 GFF1943 DNA polymerase III alpha subunit (EC 2.7.7.7) -0.51
    10 GFF3386 hypothetical protein -0.50
    11 GFF23 no description -0.50
    12 GFF2829 Uncharacterized protein CC_3060 -0.50
    13 GFF4418 Conjugative transfer protein TrbJ -0.49
    14 GFF4108 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) -0.48
    15 GFF6722 Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) -0.48
    16 GFF6635 FIG00441227: hypothetical protein -0.47
    17 GFF5586 Acetoin dehydrogenase E1 component beta-subunit (EC 2.3.1.190) -0.47
    18 GFF839 Retron-type RNA-directed DNA polymerase (EC 2.7.7.49) -0.47
    19 GFF5160 Outer membrane protein W precursor -0.45
    20 GFF6448 Glucans biosynthesis protein D precursor -0.45

    Or look for positive cofitness