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  • Negative cofitness for PS417_28300 from Pseudomonas simiae WCS417

    N-acetylmuramoyl-L-alanine amidase
    SEED: N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)
    KEGG: N-acetylmuramoyl-L-alanine amidase

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_19620 hypothetical protein -0.25
    2 PS417_08540 RNA helicase -0.23
    3 PS417_21580 chemotaxis protein CheW -0.21
    4 PS417_12020 peptidase -0.21
    5 PS417_16535 NUDIX hydrolase -0.21
    6 PS417_19630 LuxR family transcriptional regulator -0.21
    7 PS417_00295 hypothetical protein -0.21
    8 PS417_00595 chemotaxis protein -0.20
    9 PS417_03230 TetR family transcriptional regulator -0.20
    10 PS417_19625 histidine kinase -0.20
    11 PS417_19685 protein phosphatase -0.20
    12 PS417_26750 homoserine acetyltransferase -0.20
    13 PS417_19870 flagellar rod assembly protein FlgJ -0.20
    14 PS417_12940 sugar ABC transporter substrate-binding protein -0.20
    15 PS417_21585 flagellar basal body P-ring biosynthesis protein FlgA -0.20
    16 PS417_24125 hypothetical protein -0.20
    17 PS417_00635 sulfonate ABC transporter ATP-binding protein -0.19
    18 PS417_00630 nitrate ABC transporter substrate-binding protein -0.19
    19 PS417_02520 chemotaxis protein -0.19
    20 PS417_08620 hypothetical protein -0.19

    Or look for positive cofitness