Negative cofitness for GFF5516 from Variovorax sp. SCN45

D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)
SEED: D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)
KEGG: D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4)

Computing cofitness values with 61 experiments...

Genes with the strongest negative cofitness:

Rank	Hit	Name	Description	Cofit
1	GFF4456		Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	-0.70
2	GFF2300		Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1	-0.64
3	GFF3723		Cytochrome c5	-0.64
4	GFF273		Transcriptional regulator, Xre family	-0.64
5	GFF2298		Cytochrome c oxidase polypeptide I (EC 1.9.3.1)	-0.62
6	GFF4593		Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4)	-0.62
7	GFF270		2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) (EC 4.2.1.117)	-0.62
8	GFF2306		Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA	-0.61
9	GFF6696		Ubiquinol-cytochrome C reductase, cytochrome C1 subunit	-0.61
10	GFF254		N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17), type 2	-0.61
11	GFF2297		Cytochrome c oxidase polypeptide II (EC 1.9.3.1)	-0.60
12	GFF6382		ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate)	-0.60
13	GFF168		MCP methyltransferase, CheR-type	-0.60
14	GFF2304		Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion	-0.59
15	GFF3264		Methionine biosynthesis protein MetW	-0.59
16	GFF7380		3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4)	-0.59
17	GFF1372		Uncharacterized MFS-type transporter	-0.59
18	GFF5246		Threonine dehydratase biosynthetic (EC 4.3.1.19)	-0.58
19	GFF475		Acetyl-CoA synthetase (EC 6.2.1.1)	-0.58
20	GFF2714		2-ketogluconate utilization repressor PtxS	-0.58

Or look for positive cofitness