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  • Negative cofitness for GFF5502 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: Chromosome initiation inhibitor

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4943 Chloride channel protein -0.59
    2 GFF472 hypothetical protein -0.54
    3 GFF2876 no description -0.53
    4 GFF3548 hypothetical protein -0.52
    5 GFF2362 PQQ-dependent oxidoreductase, gdhB family -0.51
    6 GFF4969 Oxidoreductase, short-chain dehydrogenase/reductase family -0.49
    7 GFF1064 Transcriptional regulator, GntR family -0.49
    8 GFF6323 Benzoate transport protein -0.48
    9 GFF6517 Cation transport protein ChaC -0.48
    10 GFF4781 AttH component of AttEFGH ABC transport system -0.48
    11 GFF5458 D-erythronate dehydrogenase (NAD+) -0.48
    12 GFF2051 FIG00463476: hypothetical protein -0.47
    13 GFF1576 2-pyrone-4,6-dicarboxylic acid hydrolase (EC 3.1.1.57) -0.47
    14 GFF5194 L-arabinose ABC transporter, substrate-binding protein AraF -0.47
    15 GFF5729 Methyl-accepting chemotaxis sensor/transducer protein -0.47
    16 GFF4087 Cystathionine beta-lyase (EC 4.4.1.8) -0.47
    17 GFF2142 Glutathione S-transferase (EC 2.5.1.18) -0.47
    18 GFF2781 Phosphopantetheine-binding -0.46
    19 GFF6357 T6SS forkhead associated domain protein ImpI/VasC -0.46
    20 GFF6128 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) -0.46

    Or look for positive cofitness