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  • Negative cofitness for PS417_27960 from Pseudomonas simiae WCS417

    Hcp1 family type VI secretion system effector
    SEED: Uncharacterized protein ImpD
    KEGG: type VI secretion system secreted protein Hcp

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_00610 aminobenzoate oxygenase -0.23
    2 PS417_25370 hypothetical protein -0.22
    3 PS417_10715 Cro/Cl family transcriptional regulator -0.21
    4 PS417_22040 GNAT family acetyltransferase -0.21
    5 PS417_14285 hypothetical protein -0.20
    6 PS417_16165 ABC transporter substrate-binding protein -0.20
    7 PS417_15450 ABC transporter permease -0.19
    8 PS417_23085 permease -0.19
    9 PS417_06020 membrane protein -0.19
    10 PS417_17820 hypothetical protein -0.19
    11 PS417_08585 ATPase AAA -0.19
    12 PS417_21110 hypothetical protein -0.18
    13 PS417_26080 TonB-dependent receptor -0.18
    14 PS417_02765 phosphate starvation-inducible protein PsiF -0.18
    15 PS417_07735 cephalosporin hydroxylase -0.17
    16 PS417_27605 hypothetical protein -0.17
    17 PS417_17765 iron ABC transporter permease -0.17
    18 PS417_22705 glycerol-3-phosphate ABC transporter substrate-binding protein -0.17
    19 PS417_03870 hypothetical protein -0.17
    20 PS417_03110 pilus assembly protein CpaB -0.17

    Or look for positive cofitness