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  • Negative cofitness for GFF5460 from Variovorax sp. SCN45

    3-oxo-tetronate 4-phosphate decarboxylase
    SEED: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4228 2-hydroxychromene-2-carboxylate isomerase -0.52
    2 GFF5669 hypothetical protein -0.51
    3 GFF1329 Peptide-methionine (R)-S-oxide reductase MsrB (EC 1.8.4.12) -0.51
    4 GFF1957 no description -0.51
    5 GFF4700 Various polyols ABC transporter, permease protein 1 -0.49
    6 GFF3370 hypothetical protein -0.49
    7 GFF5127 no description -0.48
    8 GFF5843 hypothetical protein -0.48
    9 GFF1585 Outer membrane porin protein 32 precursor -0.47
    10 GFF4903 no description -0.46
    11 GFF4688 Cobalt/zinc/cadmium efflux RND transporter, outer membrane protein CzcC -0.46
    12 GFF1933 Alkaline phosphatase (EC 3.1.3.1) -0.46
    13 GFF117 no description -0.46
    14 GFF3376 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) -0.45
    15 GFF3470 Permease of the drug/metabolite transporter (DMT) superfamily -0.44
    16 GFF3094 17 kDa surface antigen -0.44
    17 GFF3964 2-hydroxymuconic semialdehyde hydrolase (EC 3.7.1.9) -0.44
    18 GFF7172 Manganese transport protein MntH -0.44
    19 GFF4285 Tricarboxylate transport protein TctC -0.44
    20 GFF6107 Zinc transporter, ZIP family -0.44

    Or look for positive cofitness