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  • Negative cofitness for PS417_27935 from Pseudomonas simiae WCS417

    type VI secretion protein
    SEED: Type VI secretion lipoprotein/VasD
    KEGG: type VI secretion system protein VasD

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_27630 MFS transporter -0.24
    2 PS417_14950 structural protein MipA -0.23
    3 PS417_20380 hypothetical protein -0.22
    4 PS417_15575 histidine kinase -0.21
    5 PS417_05255 hypothetical protein -0.20
    6 PS417_00620 GntR family transcriptional regulator -0.18
    7 PS417_06515 beta-agarase -0.18
    8 PS417_18435 hypothetical protein -0.17
    9 PS417_10815 TetR family transcriptional regulator -0.16
    10 PS417_14390 acyl-homoserine lactone acylase subunit beta -0.16
    11 PS417_20620 glycosyl transferase family 2 -0.16
    12 PS417_14550 acetylpolyamine aminohydrolase -0.16
    13 PS417_13605 short-chain dehydrogenase -0.16
    14 PS417_21290 ABC transporter substrate-binding protein -0.16
    15 PS417_06840 beta-D-glucoside glucohydrolase -0.16
    16 PS417_11925 hypothetical protein -0.16
    17 PS417_05055 hypothetical protein -0.16
    18 PS417_12265 ACP phosphodiesterase -0.16
    19 PS417_16520 cold-shock protein -0.16
    20 PS417_01375 hypothetical protein -0.16

    Or look for positive cofitness