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  • Negative cofitness for PS417_27930 from Pseudomonas simiae WCS417

    type VI secretion protein
    SEED: Uncharacterized protein ImpJ/VasE
    KEGG: type VI secretion system protein ImpJ

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_22620 pyruvate kinase -0.21
    2 PS417_02975 3-dehydroquinate dehydratase -0.21
    3 PS417_00405 DNA polymerase I -0.20
    4 PS417_28230 transcriptional regulator -0.19
    5 PS417_25305 peptide ABC transporter permease -0.19
    6 PS417_07585 hypothetical protein -0.19
    7 PS417_20875 chromosome segregation protein SMC -0.18
    8 PS417_20930 50S rRNA methyltransferase -0.18
    9 PS417_06150 SAM-dependent methlyltransferase -0.18
    10 PS417_04305 aspartate ammonia-lyase -0.18
    11 PS417_22445 ATP-dependent DNA helicase RuvB -0.17
    12 PS417_21480 23S rRNA pseudouridylate synthase -0.17
    13 PS417_26990 RNA pyrophosphohydrolase -0.17
    14 PS417_14755 UV damage repair endonuclease UvdE -0.17
    15 PS417_22780 XRE family transcriptional regulator -0.17
    16 PS417_10990 TonB-dependent receptor -0.17
    17 PS417_09465 FMN reductase -0.16
    18 PS417_16230 ABC transporter permease -0.16
    19 PS417_15105 membrane protein -0.16
    20 PS417_08825 TetR family transcriptional regulator -0.16

    Or look for positive cofitness