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  • Negative cofitness for GFF5454 from Variovorax sp. SCN45

    Transcriptional regulator, AsnC family
    SEED: Transcriptional regulator, AsnC family

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF5810 Multidrug efflux system MdtABC-TolC, membrane fusion component MdtA -0.58
    2 GFF3748 KEGG: dihydrodipicolinate synthase -0.57
    3 GFF4770 Multidrug efflux system EmrAB-OMF, membrane fusion component EmrA -0.57
    4 GFF6354 T6SS component TssK (ImpJ/VasE) -0.55
    5 GFF6242 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD -0.54
    6 GFF888 BUG/TctC family periplasmic protein -0.54
    7 GFF4560 hypothetical protein -0.54
    8 GFF6218 no description -0.53
    9 GFF3304 Monofunctional biosynthetic peptidoglycan transglycosylase -0.53
    10 GFF2680 Protein of unknown function DUF1058 -0.53
    11 GFF6990 hypothetical protein -0.52
    12 GFF534 Two-component system sensor histidine kinase -0.52
    13 GFF844 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) -0.52
    14 GFF7118 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) -0.52
    15 GFF3506 Superoxide dismutase [Fe] (EC 1.15.1.1) -0.51
    16 GFF891 Gfa-like protein -0.51
    17 GFF2745 FIG074102: hypothetical protein -0.49
    18 GFF1658 Transcriptional regulator, LysR family -0.49
    19 GFF7132 Xylose isomerase-like TIM-barrel protein KPN_00539 -0.49
    20 GFF1317 no description -0.49

    Or look for positive cofitness