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  • Negative cofitness for PS417_27835 from Pseudomonas simiae WCS417

    endoribonuclease
    SEED: Bona fide RidA/YjgF/TdcF/RutC subgroup
    KEGG: TdcF protein

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_26875 histidine kinase -0.44
    2 PS417_25970 diguanylate cyclase -0.38
    3 PS417_15695 molybdenum cofactor biosynthesis protein A -0.38
    4 PS417_15715 nitrate reductase -0.34
    5 PS417_18605 LysR family transcriptional regulator -0.32
    6 PS417_04675 deoxyribonuclease -0.30
    7 PS417_28135 sodium:alanine symporter -0.29
    8 PS417_26125 glutathione S-transferase -0.29
    9 PS417_22550 ATP-binding protein -0.28
    10 PS417_20165 hypothetical protein -0.28
    11 PS417_02985 diguanylate cyclase -0.27
    12 PS417_26340 betaine-aldehyde dehydrogenase -0.27
    13 PS417_15710 nitrate reductase -0.26
    14 PS417_08920 branched-chain amino acid ABC transporter substrate-binding protein -0.26
    15 PS417_15690 ribonucleoside-triphosphate reductase -0.26
    16 PS417_09585 acetyltransferase -0.25
    17 PS417_12895 pyruvate dehydrogenase -0.24
    18 PS417_27655 LysR family transcriptional regulator -0.24
    19 PS417_28250 cell wall assembly protein -0.24
    20 PS417_00470 glutamate:protein symporter -0.23

    Or look for positive cofitness