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  • Negative cofitness for PS417_27810 from Pseudomonas simiae WCS417

    ribonuclease PH
    SEED: Ribonuclease PH (EC 2.7.7.56)
    KEGG: ribonuclease PH

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_24335 50S rRNA methyltransferase -0.38
    2 PS417_04010 glycine/betaine ABC transporter ATP-binding protein -0.36
    3 PS417_24500 DEAD/DEAH box helicase -0.30
    4 PS417_26370 RNA helicase -0.30
    5 PS417_17125 transcriptional regulator -0.29
    6 PS417_02775 heat-shock protein -0.29
    7 PS417_04020 glycine/betaine ABC transporter substrate-binding protein -0.29
    8 PS417_04290 hypothetical protein -0.27
    9 PS417_04025 glycine/betaine ABC transporter permease -0.26
    10 PS417_00355 metal ABC transporter permease -0.26
    11 PS417_06135 glycerol-3-phosphate acyltransferase -0.25
    12 PS417_02560 23S rRNA methyltransferase -0.25
    13 PS417_20930 50S rRNA methyltransferase -0.24
    14 PS417_00390 ABC transporter substrate-binding protein -0.23
    15 PS417_11430 EamA -0.23
    16 PS417_04005 ornithine decarboxylase -0.23
    17 PS417_15310 type VI secretion protein -0.23
    18 PS417_02145 potassium transporter KefA -0.23
    19 PS417_20050 cobalamin biosynthesis protein CobD -0.22
    20 PS417_21380 GntR family transcriptional regulator -0.22

    Or look for positive cofitness