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  • Negative cofitness for GFF5433 from Variovorax sp. SCN45

    Oxidoreductase, short-chain dehydrogenase/reductase family
    SEED: Oxidoreductase, short-chain dehydrogenase/reductase family (EC 1.1.1.-)

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF362 Enoyl-CoA hydratase (EC 4.2.1.17) -0.65
    2 GFF6732 High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) -0.65
    3 GFF2847 histone-like nucleoid-structuring protein H-NS -0.61
    4 GFF4556 hypothetical protein -0.61
    5 GFF1409 hypothetical protein -0.60
    6 GFF4455 TonB protein -0.59
    7 GFF3068 FIG00538108: hypothetical protein -0.59
    8 GFF5321 Type IV pilus biogenesis protein PilO -0.59
    9 GFF5319 Type IV pilus biogenesis protein PilM -0.58
    10 GFF5415 Type IV fimbrial biogenesis protein PilV -0.58
    11 GFF2509 Type IV fimbrial assembly protein PilC -0.58
    12 GFF993 Type IV pilus biogenesis protein PilF -0.58
    13 GFF5490 Uncharacterized protein with LysM domain, COG1652 -0.58
    14 GFF5323 Type IV pilus biogenesis protein PilQ -0.58
    15 GFF5418 Type IV fimbrial biogenesis protein PilY1 -0.58
    16 GFF5417 hypothetical protein -0.58
    17 GFF5322 Type IV pilus biogenesis protein PilP -0.58
    18 GFF4670 Transcriptional regulator, AcrR family -0.57
    19 GFF3886 Putative transmembrane protein -0.57
    20 GFF5320 Type IV pilus biogenesis protein PilN -0.57

    Or look for positive cofitness