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  • Negative cofitness for PS417_27585 from Pseudomonas simiae WCS417

    diaminopimelate epimerase
    SEED: Diaminopimelate epimerase (EC 5.1.1.7)
    KEGG: diaminopimelate epimerase

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_11930 hypothetical protein -0.27
    2 PS417_02985 diguanylate cyclase -0.24
    3 PS417_27610 hypothetical protein -0.24
    4 PS417_28250 cell wall assembly protein -0.23
    5 PS417_03115 pilus assembly protein -0.23
    6 PS417_24265 ABC transporter ATP-binding protein -0.23
    7 PS417_17195 pyruvate dehydrogenase -0.22
    8 PS417_25970 diguanylate cyclase -0.22
    9 PS417_22550 ATP-binding protein -0.21
    10 PS417_02840 hypothetical protein -0.21
    11 PS417_20175 LysR family transcriptional regulator -0.20
    12 PS417_22570 H-NS histone -0.20
    13 PS417_20215 nitrate reductase -0.20
    14 PS417_26650 histidine kinase -0.19
    15 PS417_26655 chemotaxis protein -0.19
    16 PS417_11900 conjugal transfer protein TraR -0.19
    17 PS417_15705 nitrate reductase -0.19
    18 PS417_26660 protein PilI -0.19
    19 PS417_04675 deoxyribonuclease -0.19
    20 PS417_00260 gluconate 2-dehydrogenase -0.19

    Or look for positive cofitness