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  • Negative cofitness for GFF5388 from Variovorax sp. SCN45

    Two-component response regulatory protein BP2547
    SEED: Response regulator receiver:Transcriptional regulatory protein, C- terminal
    KEGG: two-component system, OmpR family, response regulator

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF650 Response regulator -0.56
    2 GFF4484 ATP-dependent protease subunit HslV (EC 3.4.25.2) -0.51
    3 GFF5542 no description -0.46
    4 GFF2244 hypothetical protein -0.46
    5 GFF1449 Predicted pyridoxine biosynthesis protein (probably from glycolaldehide) -0.45
    6 GFF2982 Histone acetyltransferase HPA2 and related acetyltransferases -0.45
    7 GFF3193 no description -0.45
    8 GFF1966 Apolipoprotein N-acyltransferase / Copper homeostasis protein CutE -0.45
    9 GFF4117 Translation elongation factor Tu -0.45
    10 GFF6239 Catalase KatE-intracellular protease (EC 1.11.1.6) -0.44
    11 GFF7322 hypothetical protein -0.44
    12 GFF6821 ribonuclease H -0.44
    13 GFF415 hypothetical protein -0.44
    14 GFF1866 Dihydropyrimidinase (EC 3.5.2.2) @ D-hydantoinase (EC 3.5.2.2) -0.44
    15 GFF4157 hypothetical protein -0.43
    16 GFF3672 no description -0.43
    17 GFF5433 Oxidoreductase, short-chain dehydrogenase/reductase family -0.42
    18 GFF1562 Transcriptional regulator, LysR family -0.42
    19 GFF6008 Citrate synthase (si) (EC 2.3.3.1) -0.41
    20 GFF5583 Transcriptional regulator PA0181, LysR family -0.41

    Or look for positive cofitness