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  • Negative cofitness for GFF5381 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: Transcriptional regulator, LysR family

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4507 no description -0.58
    2 GFF2151 twitching motility protein PilG -0.57
    3 GFF2707 hypothetical protein -0.57
    4 GFF2154 twitching motility protein PilJ -0.57
    5 GFF1548 Tripartite tricarboxylate transporter TctA family -0.56
    6 GFF4512 no description -0.55
    7 GFF5118 gluconolactonase family protein -0.54
    8 GFF2379 Serine/threonine protein kinase -0.54
    9 GFF2508 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) -0.54
    10 GFF2510 Type IV fimbrial assembly, ATPase PilB -0.54
    11 GFF5320 Type IV pilus biogenesis protein PilN -0.53
    12 GFF5414 hypothetical protein -0.53
    13 GFF4485 FIG00715336: hypothetical protein -0.53
    14 GFF993 Type IV pilus biogenesis protein PilF -0.53
    15 GFF5323 Type IV pilus biogenesis protein PilQ -0.53
    16 GFF4432 Two-component system response regulator protein -0.53
    17 GFF3825 Autolysin sensor kinase (EC 2.7.3.-) -0.52
    18 GFF5321 Type IV pilus biogenesis protein PilO -0.52
    19 GFF2509 Type IV fimbrial assembly protein PilC -0.52
    20 GFF6075 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB -0.52

    Or look for positive cofitness