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  • Negative cofitness for GFF5367 from Variovorax sp. SCN45

    GTP cyclohydrolase 1 type 2 homolog YbgI
    SEED: FIG137478: Hypothetical protein YbgI

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6585 D-glycerate 2-kinase (EC 2.7.1.165) -0.64
    2 GFF4704 Oxidoreductase, short-chain dehydrogenase/reductase family (EC 1.1.1.-) -0.61
    3 GFF4353 Alpha-methylacyl-CoA racemase (EC 5.1.99.4) -0.58
    4 GFF7106 BUG/TctC family periplasmic protein -0.56
    5 GFF3385 Flavin-containing monooxygenase -0.56
    6 GFF4726 hypothetical protein -0.56
    7 GFF359 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) -0.54
    8 GFF4744 Permease of the drug/metabolite transporter (DMT) superfamily -0.54
    9 GFF2978 Aromatic ring-cleaving dioxygenase -0.53
    10 GFF592 Glutamyl-Q tRNA(Asp) synthetase -0.53
    11 GFF6813 no description -0.53
    12 GFF2649 putative autotransporter protein -0.52
    13 GFF4393 Uncharacterized ABC1 family protein XCC_1720 -0.52
    14 GFF4675 no description -0.52
    15 GFF6208 Cytosine/purine/uracil/thiamine/allantoin permease family protein -0.52
    16 GFF6169 Na(+) H(+) antiporter subunit F -0.52
    17 GFF7103 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (EC 5.3.3.-) -0.52
    18 GFF1232 Uncharacterized protein conserved in bacteria -0.52
    19 GFF3665 no description -0.51
    20 GFF6768 hypothetical protein -0.51

    Or look for positive cofitness