Negative cofitness for GFF5341 from Variovorax sp. SCN45

Efflux ABC transporter, permease protein
SEED: ABC-type multidrug transport system, permease component
KEGG: antibiotic transport system permease protein

Computing cofitness values with 61 experiments...

Genes with the strongest negative cofitness:

Rank	Hit	Name	Description	Cofit
1	GFF5322		Type IV pilus biogenesis protein PilP	-0.63
2	GFF6075		Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB	-0.63
3	GFF5415		Type IV fimbrial biogenesis protein PilV	-0.63
4	GFF33		Type IV pilus biogenesis protein PilZ	-0.62
5	GFF5319		Type IV pilus biogenesis protein PilM	-0.62
6	GFF5414		hypothetical protein	-0.62
7	GFF3825		Autolysin sensor kinase (EC 2.7.3.-)	-0.62
8	GFF5418		Type IV fimbrial biogenesis protein PilY1	-0.62
9	GFF5323		Type IV pilus biogenesis protein PilQ	-0.62
10	GFF4432		Two-component system response regulator protein	-0.62
11	GFF5417		hypothetical protein	-0.62
12	GFF5419		Type IV pilus biogenesis protein PilE	-0.62
13	GFF2508		Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-)	-0.61
14	GFF2510		Type IV fimbrial assembly, ATPase PilB	-0.61
15	GFF2519		FIG016425: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)	-0.61
16	GFF5320		Type IV pilus biogenesis protein PilN	-0.61
17	GFF5490		Uncharacterized protein with LysM domain, COG1652	-0.61
18	GFF2509		Type IV fimbrial assembly protein PilC	-0.61
19	GFF6290		RNA polymerase sigma-54 factor RpoN	-0.61
20	GFF3886		Putative transmembrane protein	-0.61

Or look for positive cofitness