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  • Negative cofitness for GFF5254 from Variovorax sp. SCN45

    ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines)
    SEED: Putative gluthatione transporter,solute-binding component
    KEGG: peptide/nickel transport system substrate-binding protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF1687 BUG/TctC family periplasmic protein -0.55
    2 GFF5754 Flagellar cap protein FliD -0.55
    3 GFF7 no description -0.50
    4 GFF4570 Acyl-CoA dehydrogenase, long-chain specific (EC 1.3.8.8) -0.50
    5 GFF7308 Uncharacterized MFS-type transporter -0.50
    6 GFF2776 hypothetical protein -0.49
    7 GFF3782 hypothetical protein -0.49
    8 GFF4321 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) -0.49
    9 GFF3078 SAM-dependent methyltransferase -0.48
    10 GFF5277 Sorbitol dehydrogenase (EC 1.1.1.14) -0.48
    11 GFF5998 Uncharacterized protein YiiX -0.47
    12 GFF5217 Ferric iron ABC transporter, iron-binding protein -0.47
    13 GFF1824 hypothetical protein -0.47
    14 GFF2595 Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) -0.46
    15 GFF1684 no description -0.46
    16 GFF2404 Hypothetical protein with Rieske (2Fe-2S) region -0.46
    17 GFF6750 hypothetical protein -0.46
    18 GFF4802 Osmotically-inducible lipoprotein OsmB -0.45
    19 GFF2992 BUG/TctC family periplasmic protein -0.45
    20 GFF5818 Two-component transcriptional response regulator, NarL/FixJ family -0.45

    Or look for positive cofitness