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  • Negative cofitness for PS417_02665 from Pseudomonas simiae WCS417

    branched-chain amino acid ABC transporter permease
    SEED: Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1)
    KEGG: branched-chain amino acid transport system permease protein

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_22550 ATP-binding protein -0.42
    2 PS417_25970 diguanylate cyclase -0.41
    3 PS417_02985 diguanylate cyclase -0.33
    4 PS417_04675 deoxyribonuclease -0.30
    5 PS417_26875 histidine kinase -0.30
    6 PS417_24265 ABC transporter ATP-binding protein -0.28
    7 PS417_27610 hypothetical protein -0.27
    8 PS417_24680 murein transglycosylase -0.27
    9 PS417_20165 hypothetical protein -0.26
    10 PS417_18605 LysR family transcriptional regulator -0.26
    11 PS417_28250 cell wall assembly protein -0.25
    12 PS417_17170 carbon-nitrogen hydrolase -0.25
    13 PS417_02835 branched-chain amino acid ABC transporter substrate-binding protein -0.24
    14 PS417_11930 hypothetical protein -0.23
    15 PS417_07380 hypothetical protein -0.22
    16 PS417_18890 MFS transporter -0.21
    17 PS417_08500 LysR family transcriptional regulator -0.21
    18 PS417_20970 MFS transporter -0.21
    19 PS417_24715 lytic transglycosylase -0.20
    20 PS417_08345 chemotaxis protein -0.20

    Or look for positive cofitness