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  • Negative cofitness for PS417_26760 from Pseudomonas simiae WCS417

    oxidase
    SEED: Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB
    KEGG: oxygen-independent coproporphyrinogen III oxidase

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_17000 MerR family transcriptional regulator -0.34
    2 PS417_22325 amino acid APC transporter -0.32
    3 PS417_12595 transcriptional regulator -0.31
    4 PS417_24680 murein transglycosylase -0.30
    5 PS417_21730 peptidase M14 -0.28
    6 PS417_26255 hypothetical protein -0.27
    7 PS417_07260 2-deoxy-D-ribonate transporter 2 (from data) -0.27
    8 PS417_07445 peptidase S9 -0.27
    9 PS417_07255 Deoxyribonolactonase (from data) -0.26
    10 PS417_28250 cell wall assembly protein -0.26
    11 PS417_22670 AraC family transcriptional regulator -0.25
    12 PS417_26875 histidine kinase -0.25
    13 PS417_00620 GntR family transcriptional regulator -0.25
    14 PS417_07265 2-deoxy-D-ribonate transporter 1 (from data) -0.25
    15 PS417_27610 hypothetical protein -0.25
    16 PS417_06385 DEAD/DEAH box helicase -0.25
    17 PS417_20325 hypothetical protein -0.24
    18 PS417_10885 Deoxyribose 1-dehydrogenase, beta subunit (from data) -0.24
    19 PS417_15710 nitrate reductase -0.24
    20 PS417_22385 quinolinate synthase A -0.24

    Or look for positive cofitness