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  • Negative cofitness for GFF5221 from Variovorax sp. SCN45

    Phosphonoacetaldehyde hydrolase (EC 3.11.1.1)
    SEED: Phosphonoacetaldehyde hydrolase (EC 3.11.1.1)
    KEGG: phosphonoacetaldehyde hydrolase

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF5544 FIG001614: Membrane protein -0.65
    2 GFF6319 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) -0.61
    3 GFF6353 T6SS outer membrane component TssL (ImpK/VasF) / OmpA/MotB domain -0.61
    4 GFF5848 Flagellar motor protein -0.58
    5 GFF436 LrgA-associated membrane protein LrgB -0.58
    6 GFF6585 D-glycerate 2-kinase (EC 2.7.1.165) -0.57
    7 GFF1349 Thioesterase -0.57
    8 GFF2119 Type IV fimbrial biogenesis protein PilW -0.56
    9 GFF5257 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) -0.55
    10 GFF2975 SAM-dependent methyltransferase -0.55
    11 GFF318 Uncharacterized protein YjgR -0.55
    12 GFF2313 Two-component system sensor histidine kinase -0.54
    13 GFF2531 Transcriptional regulator, AsnC family -0.54
    14 GFF4393 Uncharacterized ABC1 family protein XCC_1720 -0.53
    15 GFF251 hypothetical protein -0.53
    16 GFF2649 putative autotransporter protein -0.53
    17 GFF6337 Ser/Thr protein phosphatase family protein -0.53
    18 GFF312 FIG021862: membrane protein, exporter -0.52
    19 GFF5806 RNA polymerase ECF-type sigma factor -0.52
    20 GFF5581 SSU ribosomal protein S5p (S2e) -0.52

    Or look for positive cofitness