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  • Negative cofitness for GFF52 from Variovorax sp. SCN45

    Polyketide synthase modules and related proteins
    SEED: Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39)

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3778 Wax ester synthase/acyl-CoA:diacylglycerol acyltransferase -0.62
    2 GFF1009 Transcriptional regulator, AraC family -0.58
    3 GFF1354 FMN-dependent NADH-azoreductase (EC 1.7.1.6) -0.54
    4 GFF4551 Putative preQ0 transporter YhhQ -0.53
    5 GFF543 Uncharacterized deacetylase PA5390 -0.53
    6 GFF4844 Conjugative transfer protein TrbL -0.52
    7 GFF1668 BUG/TctC family periplasmic protein -0.52
    8 GFF4827 FIG00348957: hypothetical protein -0.52
    9 GFF310 FIG025233: SAM-dependent methyltransferases -0.51
    10 GFF6348 no description -0.51
    11 GFF5374 Glutamine amidotransferase, class I -0.50
    12 GFF495 Kup system potassium uptake protein -0.49
    13 GFF1878 Bll6165 protein -0.49
    14 GFF6287 no description -0.48
    15 GFF4241 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) -0.48
    16 GFF1165 2-isopropylmalate synthase (EC 2.3.3.13) -0.48
    17 GFF1644 hypothetical protein -0.48
    18 GFF1505 Cytosolic acyl coenzyme A thioester hydrolase, inducible (EC 3.1.2.2) -0.48
    19 GFF5293 N-carbamoyl-L-amino acid hydrolase (EC 3.5.1.87) -0.48
    20 GFF4332 Aldehyde dehydrogenase (EC 1.2.1.3) -0.47

    Or look for positive cofitness