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  • Negative cofitness for GFF5199 from Variovorax sp. SCN45

    Galactofuranose ABC transporter, permease protein 2
    SEED: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
    KEGG: simple sugar transport system permease protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF1795 Hydantoin racemase (EC 5.1.99.5) -0.56
    2 GFF7042 Acetyltransferase, GNAT family -0.53
    3 GFF6928 Putative transmembrane protein -0.53
    4 GFF6861 no description -0.53
    5 GFF7250 Putative transposase InsK for insertion sequence element IS150 -0.53
    6 GFF784 KEGG: RNA polymerase sigma-70 factor, ECF subfamily -0.53
    7 GFF5087 DNA repair protein RadA -0.52
    8 GFF2640 PKHD-type hydroxylase YbiX -0.52
    9 GFF1829 4-hydroxybenzoyl-CoA thioesterase (EC 3.1.2.23) -0.52
    10 GFF1273 no description -0.51
    11 GFF923 Chromosome partition protein smc -0.51
    12 GFF3426 Predicted kinase -0.50
    13 GFF3398 benzoate degradation ring-cleavage hydrolase -0.49
    14 GFF3127 no description -0.49
    15 GFF3367 Septum site-determining protein MinC -0.49
    16 GFF3869 Putative transmembrane protein -0.48
    17 GFF5272 Various polyols ABC transporter, substrate-binding protein -0.48
    18 GFF110 pyridoxal-phosphate dependent enzyme family protein -0.48
    19 GFF3508 Multidrug efflux system, outer membrane factor lipoprotein => OpmD of MexHI-OpmD system -0.48
    20 GFF2212 KEGG: prepilin peptidase CpaA -0.48

    Or look for positive cofitness