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  • Negative cofitness for GFF5198 from Variovorax sp. SCN45

    ABC transporter, permease protein (cluster 2, ribose/xylose/arabinose/galactose)
    SEED: Putative sugar ABC transport system, permease protein YtfT
    KEGG: simple sugar transport system permease protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF5287 FIG00455092: hypothetical protein -0.62
    2 GFF1321 Probable diguanylate cyclase YeaP -0.58
    3 GFF5540 FIG01201438: hypothetical protein -0.57
    4 GFF5940 T6SS associated component TagJ (ImpE) -0.55
    5 GFF1181 hypothetical protein -0.53
    6 GFF3717 Putative aminoacrylate peracid reductase RutC @ RidA/YER057c/UK114 superfamily protein -0.52
    7 GFF7114 hypothetical protein -0.52
    8 GFF1527 Ferrichrome-iron receptor -0.52
    9 GFF2985 BUG/TctC family periplasmic protein -0.52
    10 GFF2633 Proline iminopeptidase (EC 3.4.11.5) -0.51
    11 GFF5149 Taurine ABC transporter, ATP-binding protein TauB -0.51
    12 GFF1277 Alkanesulfonates-binding protein -0.49
    13 GFF5130 hypothetical protein -0.49
    14 GFF1117 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) -0.49
    15 GFF1472 Tricarboxylate transport protein TctC -0.48
    16 GFF6088 Phenylacetic acid degradation protein PaaY -0.48
    17 GFF7085 BUG/TctC family periplasmic protein -0.47
    18 GFF897 putative oxygenase subunit -0.47
    19 GFF4930 Transcriptional regulator, LysR family -0.47
    20 GFF5167 BLUF domain protein -0.47

    Or look for positive cofitness