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  • Negative cofitness for GFF5196 from Variovorax sp. SCN45

    L-arabinose ABC transporter, permease protein AraH
    SEED: L-arabinose transport system permease protein (TC 3.A.1.2.2)
    KEGG: putative multiple sugar transport system permease protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4192 no description -0.59
    2 GFF6687 hypothetical protein -0.59
    3 GFF1305 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) -0.56
    4 GFF1995 Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1) -0.56
    5 GFF5029 Transcriptional regulator, IclR family -0.56
    6 GFF1623 Glycerol-3-phosphate transporter -0.55
    7 GFF4453 Esterase YqiA -0.55
    8 GFF3932 Acetyltransferase, GNAT family -0.54
    9 GFF2992 BUG/TctC family periplasmic protein -0.53
    10 GFF3782 hypothetical protein -0.53
    11 GFF1637 Polyketide synthase modules and related proteins -0.52
    12 GFF4424 FIG00956188: hypothetical protein -0.52
    13 GFF7365 no description -0.51
    14 GFF1688 FIG00828468: hypothetical protein -0.50
    15 GFF1714 no description -0.50
    16 GFF469 hypothetical protein -0.50
    17 GFF1971 Creatinine amidohydrolase (EC 3.5.2.10) -0.50
    18 GFF6576 Conjugative transfer protein TrbE -0.49
    19 GFF1776 OsmC-like protein Pfl_1628 -0.49
    20 GFF321 hypothetical protein -0.49

    Or look for positive cofitness