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  • Negative cofitness for GFF5190 from Variovorax sp. SCN45

    L-arabinose 1-dehydrogenase (EC 1.1.1.376)
    SEED: Putative oxidoreductase in arabinose utilization cluster

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF5828 Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1) -0.51
    2 GFF5342 YrbA protein -0.50
    3 GFF2400 no description -0.50
    4 GFF1539 RsbT co-antagonist protein RsbRA -0.50
    5 GFF2205 hypothetical protein -0.50
    6 GFF680 RecA/RadA recombinase -0.50
    7 GFF1577 hypothetical protein -0.50
    8 GFF2810 hypothetical protein -0.49
    9 GFF684 FIG00553873: hypothetical protein -0.48
    10 GFF7135 FIG00977464: hypothetical protein -0.47
    11 GFF6587 Hydroxypyruvate isomerase (EC 5.3.1.22) -0.47
    12 GFF4322 Acyl-CoA dehydrogenase -0.47
    13 GFF4064 no description -0.47
    14 GFF2441 RND efflux system, inner membrane transporter -0.47
    15 GFF4936 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) -0.47
    16 GFF570 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) / GTP cyclohydrolase II (EC 3.5.4.25) -0.46
    17 GFF5985 dicarboxylic acid transporter PcaT -0.45
    18 GFF4277 Small subunit naph/bph dioxygenase -0.45
    19 GFF521 Secretion protein HlyD precursor -0.45
    20 GFF3287 hypothetical protein -0.45

    Or look for positive cofitness