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  • Negative cofitness for PS417_26545 from Pseudomonas simiae WCS417

    16S rRNA methyltransferase
    SEED: Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)
    KEGG: ribosomal RNA small subunit methyltransferase E

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_24680 murein transglycosylase -0.27
    2 PS417_22325 amino acid APC transporter -0.23
    3 PS417_03640 cyclopropane-fatty-acyl-phospholipid synthase -0.21
    4 PS417_07635 transcription-repair coupling factor -0.20
    5 PS417_22550 ATP-binding protein -0.20
    6 PS417_18605 LysR family transcriptional regulator -0.20
    7 PS417_20860 DNA polymerase III subunit gamma/tau -0.19
    8 PS417_25970 diguanylate cyclase -0.19
    9 PS417_20620 glycosyl transferase family 2 -0.19
    10 PS417_14950 structural protein MipA -0.19
    11 PS417_03655 short-chain dehydrogenase -0.19
    12 PS417_26660 protein PilI -0.19
    13 PS417_21470 peptidase S49 -0.18
    14 PS417_22205 potassium transporter TrkH -0.18
    15 PS417_02985 diguanylate cyclase -0.18
    16 PS417_25700 cyclic AMP receptor protein -0.18
    17 PS417_00620 GntR family transcriptional regulator -0.18
    18 PS417_20670 glycosyl transferase family 2 -0.18
    19 PS417_21380 GntR family transcriptional regulator -0.18
    20 PS417_20595 hypothetical protein -0.17

    Or look for positive cofitness