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  • Negative cofitness for GFF5162 from Sphingobium sp. HT1-2

    RNA polymerase, sigma-24 subunit, ECF subfamily
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Computing cofitness values with 18 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3230 Transposase -0.74
    2 GFF229 Short-chain dehydrogenase/reductase SDR -0.70
    3 GFF11 hypothetical protein -0.67
    4 GFF2372 RNA binding S1 domain protein -0.66
    5 GFF2240 D-xylose proton-symporter XylE -0.65
    6 GFF1413 Magnesium and cobalt transport protein CorA -0.65
    7 GFF811 Putative reductase -0.65
    8 GFF1980 Flp pilus assembly protein CpaD -0.65
    9 GFF3704 Flagellar hook-associated protein FlgL -0.65
    10 GFF3800 Multidrug efflux system EmrAB-OMF, membrane fusion component EmrA -0.65
    11 GFF3891 hypothetical protein -0.64
    12 GFF331 Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61) -0.64
    13 GFF4886 Cyclohexanone monooxygenase (EC 1.14.13.22) -0.64
    14 GFF5252 Prevent host death protein, Phd antitoxin -0.64
    15 GFF1040 hypothetical protein -0.63
    16 GFF1784 hypothetical protein -0.63
    17 GFF22 hypothetical protein -0.62
    18 GFF1113 Two-component system sensor histidine kinase/response regulator hybrid -0.62
    19 GFF4348 hypothetical protein -0.61
    20 GFF3330 Cell division protein BolA -0.61

    Or look for positive cofitness