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  • Negative cofitness for GFF5158 from Variovorax sp. SCN45

    Trehalose-6-phosphate phosphatase (EC 3.1.3.12)
    SEED: Trehalose-6-phosphate phosphatase (EC 3.1.3.12)
    KEGG: trehalose-phosphatase

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF2836 MotA/TolQ/ExbB proton channel family protein -0.90
    2 GFF2835 putative TonB-dependent receptor -0.89
    3 GFF1119 Ribonuclease HI (EC 3.1.26.4) -0.89
    4 GFF5429 Iron(III) dicitrate transport protein FecA -0.86
    5 GFF240 Cytosol aminopeptidase PepA (EC 3.4.11.1) -0.83
    6 GFF6392 hypothetical protein -0.81
    7 GFF4406 Alkane-1 monooxygenase (EC 1.14.15.3) -0.77
    8 GFF4000 ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) -0.77
    9 GFF549 DNA-3-methyladenine glycosylase II (EC 3.2.2.21) -0.77
    10 GFF3758 NAD-specific glutamate dehydrogenase (EC 1.4.1.2); NADP-specific glutamate dehydrogenase (EC 1.4.1.4) -0.76
    11 GFF5035 Opine oxidase subunit A -0.72
    12 GFF2505 hypothetical protein -0.70
    13 GFF5817 Two-component system sensor histidine kinase -0.69
    14 GFF6294 Cell division protein -0.69
    15 GFF4396 Mobile element protein -0.67
    16 GFF2506 Probable poly(beta-D-mannuronate) O-acetylase (EC 2.3.1.-) -0.67
    17 GFF4407 Alkan-1-ol dehydrogenase, PQQ-dependent (EC 1.1.99.20) -0.66
    18 GFF4408 3-methylmercaptopropionyl-CoA ligase (EC 6.2.1.44) of DmdB2 type -0.66
    19 GFF5572 FIG00984604: hypothetical protein -0.66
    20 GFF531 hypothetical protein -0.64

    Or look for positive cofitness