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  • Negative cofitness for GFF5154 from Variovorax sp. SCN45

    DNA-binding transcriptional regulator, MocR family / aminotransferase domain
    SEED: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF5118 gluconolactonase family protein -0.60
    2 GFF5117 Transcriptional regulator, LysR family -0.59
    3 GFF4068 Heavy metal sensor histidine kinase -0.59
    4 GFF2183 Outer membrane component of TAM transport system -0.58
    5 GFF1941 hypothetical protein -0.56
    6 GFF600 Metal-dependent phosphohydrolase, HD subdomain -0.56
    7 GFF967 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) -0.55
    8 GFF362 Enoyl-CoA hydratase (EC 4.2.1.17) -0.55
    9 GFF6389 Amidohydrolase domain protein -0.55
    10 GFF3731 Glutathione S-transferase -0.55
    11 GFF2182 Inner membrane component of TAM transport system -0.54
    12 GFF5210 hypothetical protein -0.54
    13 GFF4989 Transcriptional regulator, LysR family -0.53
    14 GFF770 Limit dextrin alpha-1,6-maltotetraose-hydrolase (EC 3.2.1.196) -0.53
    15 GFF6638 no description -0.53
    16 GFF4264 surface antigen gene -0.53
    17 GFF613 hypothetical protein -0.53
    18 GFF5987 Response regulator BaeR -0.52
    19 GFF5604 D-xylose ABC transporter, permease protein XylH -0.52
    20 GFF2151 twitching motility protein PilG -0.52

    Or look for positive cofitness