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  • Negative cofitness for GFF515 from Variovorax sp. SCN45

    ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate)
    SEED: Benzoate transport, extracellular ligand-binding receptor
    KEGG: branched-chain amino acid transport system substrate-binding protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF7323 Transcriptional response regulatory protein GlrR -0.65
    2 GFF6103 no description -0.57
    3 GFF765 hypothetical protein -0.54
    4 GFF5840 hypothetical protein -0.54
    5 GFF6289 Cardiolipin synthase (EC 2.7.8.-) phosphatidylethanolamine-utilizing, bacterial type ClsC -0.53
    6 GFF7097 Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) -0.53
    7 GFF7322 hypothetical protein -0.53
    8 GFF3299 Pirin -0.52
    9 GFF3434 Organic hydroperoxide resistance protein -0.52
    10 GFF6278 Ferredoxin-dependent glutamate synthase (EC 1.4.7.1) -0.52
    11 GFF7154 Toxin HigB / Protein kinase domain of HipA -0.52
    12 GFF4619 Altronate dehydratase (EC 4.2.1.7) -0.52
    13 GFF4784 no description -0.51
    14 GFF5941 hypothetical protein -0.50
    15 GFF3135 no description -0.50
    16 GFF1507 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) -0.50
    17 GFF4422 Conjugative transfer protein TrbG -0.50
    18 GFF304 Ubiquinone/menaquinone biosynthesis methyltransferase family protein -0.49
    19 GFF6472 membrane efflux protein -0.49
    20 GFF6812 no description -0.49

    Or look for positive cofitness